@book{lund2005immunological,
  title={Immunological bioinformatics},
  author={Lund, O. and Nielsen, M. and Lundegaard, C. and Kesmir, C. and Brunak, S.},
  year={2005},
  publisher={MIT press}
}

@book{baldi2001bioinformatics,
  title={Bioinformatics: the machine learning approach},
  author={Baldi, P. and Brunak, S.},
  year={2001},
  publisher={MIT press}
}

@article{nielsen2003reliable,
  title={Reliable prediction of T-cell epitopes using neural networks with novel sequence representations},
  author={Nielsen, M. and Lundegaard, C. and Worning, P. and Lauem{\o}ller, S.L. and Lamberth, K. and Buus, S. and Brunak, S. and Lund, O. and Nielsen, M. and Lundegaard, C. and others},
  journal={Protein Science: A Publication of the Protein Society},
  volume={12},
  number={5},
  pages={1007},
  year={2003},
  publisher={Blackwell Publishing}
}

@article{lundegaard2008netmhc,
  title={NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8--11},
  author={Lundegaard, C. and Lamberth, K. and Harndahl, M. and Buus, S. and Lund, O. and Nielsen, M.},
  journal={Nucleic acids research},
  volume={36},
  number={suppl 2},
  pages={W509--W512},
  year={2008},
  publisher={Oxford Univ Press}
}

@article{karosiene2012netmhccons,
  title={NetMHCcons: a consensus method for the major histocompatibility complex class I predictions},
  author={Karosiene, E. and Lundegaard, C. and Lund, O. and Nielsen, M.},
  journal={Immunogenetics},
  pages={1--10},
  year={2012},
  publisher={Springer}
}

@article{hansen1990neural,
  title={Neural network ensembles},
  author={Hansen, L.K. and Salamon, P.},
  journal={Pattern Analysis and Machine Intelligence, IEEE Transactions on},
  volume={12},
  number={10},
  pages={993--1001},
  year={1990},
  publisher={IEEE}
}

@article{nielsen2009nn,
  title={NN-align. An artificial neural network-based alignment algorithm for MHC class II peptide binding prediction},
  author={Nielsen, M. and Lund, O.},
  journal={BMC bioinformatics},
  volume={10},
  number={1},
  pages={296},
  year={2009},
  publisher={BioMed Central Ltd}
}

@article{zhou2002lung,
  title={Lung cancer cell identification based on artificial neural network ensembles},
  author={Zhou, Z.H. and Jiang, Y. and Yang, Y.B. and Chen, S.F.},
  journal={Artificial Intelligence in Medicine},
  volume={24},
  number={1},
  pages={25--36},
  year={2002},
  publisher={Elsevier}
}

@article{fernandez2005modeling,
  title={Modeling of Cyclin-Dependent Kinase Inhibition by 1 H-Pyrazolo [3, 4-d] Pyrimidine Derivatives Using Artificial Neural Network Ensembles},
  author={Fernandez, M. and Tundidor-Camba, A. and Caballero, J.},
  journal={Journal of chemical information and modeling},
  volume={45},
  number={6},
  pages={1884--1895},
  year={2005},
  publisher={ACS Publications}
}